Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP3BO95985 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TOP3BO95985 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
TOP3BO95985 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TOP3BO95985 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP3BO95985 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TOP3BO95985 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 AL603756.1-201ENST00000606511 2163 ntBASIC17.24■□□□□ 0.35
TOP3BO95985 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.24■□□□□ 0.35
TOP3BO95985 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.24■□□□□ 0.35
TOP3BO95985 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP3BO95985 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.24■□□□□ 0.35
TOP3BO95985 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.24■□□□□ 0.35
TOP3BO95985 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.24■□□□□ 0.35
TOP3BO95985 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP3BO95985 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.24■□□□□ 0.35
TOP3BO95985 AC005593.1-201ENST00000624894 515 ntBASIC17.24■□□□□ 0.35
TOP3BO95985 AC002310.6-201ENST00000624451 1377 ntBASIC17.24■□□□□ 0.35
TOP3BO95985 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.24■□□□□ 0.35
TOP3BO95985 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TOP3BO95985 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TOP3BO95985 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.23■□□□□ 0.35
TOP3BO95985 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.23■□□□□ 0.35
TOP3BO95985 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.23■□□□□ 0.35
TOP3BO95985 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 ELL2P1-201ENST00000413990 1906 ntBASIC17.23■□□□□ 0.35
TOP3BO95985 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.23■□□□□ 0.35
TOP3BO95985 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 AC004817.3-201ENST00000602957 2129 ntBASIC17.23■□□□□ 0.35
TOP3BO95985 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TOP3BO95985 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TOP3BO95985 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.22■□□□□ 0.35
TOP3BO95985 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 AC046158.3-201ENST00000624947 2558 ntBASIC17.22■□□□□ 0.35
TOP3BO95985 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TOP3BO95985 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TOP3BO95985 AC073621.1-201ENST00000392730 636 ntBASIC17.22■□□□□ 0.35
TOP3BO95985 KRT18P27-201ENST00000427733 1299 ntBASIC17.22■□□□□ 0.35
TOP3BO95985 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.22■□□□□ 0.35
TOP3BO95985 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.22■□□□□ 0.35
TOP3BO95985 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms