Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RTN3O95197 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.71■□□□□ 0.43
RTN3O95197 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RTN3O95197 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
RTN3O95197 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RTN3O95197 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RTN3O95197 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RTN3O95197 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 AC131009.4-201ENST00000624048 1740 ntBASIC17.7■□□□□ 0.42
RTN3O95197 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 DNAJB3-202ENST00000449667 1266 ntBASIC17.7■□□□□ 0.42
RTN3O95197 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.7■□□□□ 0.42
RTN3O95197 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.7■□□□□ 0.42
RTN3O95197 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RTN3O95197 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.7■□□□□ 0.42
RTN3O95197 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 SLC22A20-204ENST00000530038 1673 ntBASIC17.7■□□□□ 0.42
RTN3O95197 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.7■□□□□ 0.42
RTN3O95197 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RTN3O95197 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
RTN3O95197 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.69■□□□□ 0.42
RTN3O95197 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RTN3O95197 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.69■□□□□ 0.42
RTN3O95197 SNHG9-202ENST00000564014 471 ntBASIC17.69■□□□□ 0.42
RTN3O95197 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN3O95197 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN3O95197 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTN3O95197 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RTN3O95197 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.69■□□□□ 0.42
RTN3O95197 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RTN3O95197 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.69■□□□□ 0.42
RTN3O95197 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.69■□□□□ 0.42
RTN3O95197 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RTN3O95197 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.69■□□□□ 0.42
RTN3O95197 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.68■□□□□ 0.42
RTN3O95197 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.68■□□□□ 0.42
RTN3O95197 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RTN3O95197 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RTN3O95197 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.68■□□□□ 0.42
RTN3O95197 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN3O95197 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RTN3O95197 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RTN3O95197 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RTN3O95197 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms