Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC080080.1-201ENST00000625121 2420 ntBASIC17.29■□□□□ 0.36
TSPAN3O60637 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TSPAN3O60637 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.29■□□□□ 0.36
TSPAN3O60637 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 AC004461.1-201ENST00000412461 403 ntBASIC17.29■□□□□ 0.36
TSPAN3O60637 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TSPAN3O60637 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.29■□□□□ 0.36
TSPAN3O60637 KRT8P48-201ENST00000515599 1220 ntBASIC17.29■□□□□ 0.36
TSPAN3O60637 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.29■□□□□ 0.36
TSPAN3O60637 AC027796.2-201ENST00000575326 344 ntBASIC17.29■□□□□ 0.36
TSPAN3O60637 MIR4492-201ENST00000581627 80 ntBASIC17.29■□□□□ 0.36
TSPAN3O60637 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
TSPAN3O60637 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.29■□□□□ 0.36
TSPAN3O60637 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.29■□□□□ 0.36
TSPAN3O60637 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TSPAN3O60637 AP001094.4-201ENST00000579008 2176 ntBASIC17.29■□□□□ 0.36
TSPAN3O60637 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TSPAN3O60637 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.28■□□□□ 0.36
TSPAN3O60637 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TSPAN3O60637 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 KRT18P28-201ENST00000453838 1332 ntBASIC17.28■□□□□ 0.36
TSPAN3O60637 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 RNU1-129P-201ENST00000384064 167 ntBASIC17.28■□□□□ 0.36
TSPAN3O60637 METTL21AP1-201ENST00000438852 635 ntBASIC17.28■□□□□ 0.36
TSPAN3O60637 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.28■□□□□ 0.36
TSPAN3O60637 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TSPAN3O60637 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.28■□□□□ 0.36
TSPAN3O60637 U1.21-201ENST00000580816 167 ntBASIC17.28■□□□□ 0.36
TSPAN3O60637 AC022145.2-201ENST00000598203 171 ntBASIC17.28■□□□□ 0.36
TSPAN3O60637 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.28■□□□□ 0.36
TSPAN3O60637 AL355385.1-201ENST00000606123 409 ntBASIC17.28■□□□□ 0.36
TSPAN3O60637 AC026120.1-201ENST00000611536 926 ntBASIC17.28■□□□□ 0.36
TSPAN3O60637 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TSPAN3O60637 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TSPAN3O60637 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TSPAN3O60637 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TSPAN3O60637 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
TSPAN3O60637 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.27■□□□□ 0.36
TSPAN3O60637 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TSPAN3O60637 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TSPAN3O60637 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.27■□□□□ 0.36
TSPAN3O60637 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17.27■□□□□ 0.36
TSPAN3O60637 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 TFAMP1-201ENST00000412727 736 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 ADH5P3-201ENST00000433842 1137 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 HMGN1P19-201ENST00000436976 333 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 SPDYE11-202ENST00000450699 704 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 SPDYE9P-201ENST00000570642 692 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TSPAN3O60637 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.27■□□□□ 0.36
TSPAN3O60637 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.27■□□□□ 0.36
TSPAN3O60637 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TSPAN3O60637 AC027612.4-201ENST00000605371 583 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 SPDYE10P-202ENST00000612005 668 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 SPDYE8P-202ENST00000612377 668 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 AL513210.1-201ENST00000629608 234 ntBASIC17.27■□□□□ 0.36
TSPAN3O60637 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms