Protein–RNA interactions for Protein: O60488

ACSL4, Long-chain-fatty-acid--CoA ligase 4, humanhuman

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACSL4O60488 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACSL4O60488 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACSL4O60488 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACSL4O60488 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACSL4O60488 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
ACSL4O60488 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ACSL4O60488 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ACSL4O60488 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.24■□□□□ 0.35
ACSL4O60488 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.24■□□□□ 0.35
ACSL4O60488 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.24■□□□□ 0.35
ACSL4O60488 AC004461.1-201ENST00000412461 403 ntBASIC17.24■□□□□ 0.35
ACSL4O60488 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 AC092183.1-201ENST00000469884 875 ntBASIC17.24■□□□□ 0.35
ACSL4O60488 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
ACSL4O60488 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.24■□□□□ 0.35
ACSL4O60488 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.24■□□□□ 0.35
ACSL4O60488 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.24■□□□□ 0.35
ACSL4O60488 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ACSL4O60488 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.24■□□□□ 0.35
ACSL4O60488 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACSL4O60488 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.24■□□□□ 0.35
ACSL4O60488 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.23■□□□□ 0.35
ACSL4O60488 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.23■□□□□ 0.35
ACSL4O60488 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC17.23■□□□□ 0.35
ACSL4O60488 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.23■□□□□ 0.35
ACSL4O60488 RN7SL589P-201ENST00000481268 310 ntBASIC17.23■□□□□ 0.35
ACSL4O60488 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.23■□□□□ 0.35
ACSL4O60488 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 AC243562.1-201ENST00000560672 389 ntBASIC17.23■□□□□ 0.35
ACSL4O60488 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
ACSL4O60488 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.23■□□□□ 0.35
ACSL4O60488 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.23■□□□□ 0.35
ACSL4O60488 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.23■□□□□ 0.35
ACSL4O60488 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ACSL4O60488 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ACSL4O60488 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
ACSL4O60488 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACSL4O60488 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ACSL4O60488 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ACSL4O60488 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
ACSL4O60488 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ACSL4O60488 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ACSL4O60488 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ACSL4O60488 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ACSL4O60488 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms