Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 SNHG9-202ENST00000564014 471 ntBASIC15.75■□□□□ 0.11
FOXS1O43638 SPDYE9P-201ENST00000570642 692 ntBASIC15.75■□□□□ 0.11
FOXS1O43638 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 SPDYE10P-202ENST00000612005 668 ntBASIC15.75■□□□□ 0.11
FOXS1O43638 SPDYE8P-202ENST00000612377 668 ntBASIC15.75■□□□□ 0.11
FOXS1O43638 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXS1O43638 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
FOXS1O43638 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXS1O43638 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
FOXS1O43638 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXS1O43638 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXS1O43638 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXS1O43638 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXS1O43638 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXS1O43638 AC092183.1-201ENST00000469884 875 ntBASIC15.74■□□□□ 0.11
FOXS1O43638 RN7SL589P-201ENST00000481268 310 ntBASIC15.74■□□□□ 0.11
FOXS1O43638 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
FOXS1O43638 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXS1O43638 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.74■□□□□ 0.11
FOXS1O43638 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
FOXS1O43638 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXS1O43638 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXS1O43638 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.74■□□□□ 0.11
FOXS1O43638 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.74■□□□□ 0.11
FOXS1O43638 AC006538.1-201ENST00000567905 1585 ntBASIC15.74■□□□□ 0.11
FOXS1O43638 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.74■□□□□ 0.11
FOXS1O43638 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
FOXS1O43638 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
FOXS1O43638 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
FOXS1O43638 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXS1O43638 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXS1O43638 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
FOXS1O43638 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
FOXS1O43638 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 AGGF1P2-201ENST00000426656 2106 ntBASIC15.73■□□□□ 0.11
FOXS1O43638 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
FOXS1O43638 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
FOXS1O43638 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXS1O43638 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.73■□□□□ 0.11
FOXS1O43638 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.73■□□□□ 0.11
FOXS1O43638 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
FOXS1O43638 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms