Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
PHGDHO43175 MIR1224-201ENST00000408193 85 ntBASIC16.75■□□□□ 0.27
PHGDHO43175 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PHGDHO43175 RBM17P3-201ENST00000417687 1192 ntBASIC16.75■□□□□ 0.27
PHGDHO43175 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.75■□□□□ 0.27
PHGDHO43175 AL139424.1-201ENST00000607572 797 ntBASIC16.75■□□□□ 0.27
PHGDHO43175 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.75■□□□□ 0.27
PHGDHO43175 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.75■□□□□ 0.27
PHGDHO43175 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.75■□□□□ 0.27
PHGDHO43175 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PHGDHO43175 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.75■□□□□ 0.27
PHGDHO43175 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHGDHO43175 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHGDHO43175 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.75■□□□□ 0.27
PHGDHO43175 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PHGDHO43175 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHGDHO43175 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHGDHO43175 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.75■□□□□ 0.27
PHGDHO43175 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PHGDHO43175 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PHGDHO43175 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.74■□□□□ 0.27
PHGDHO43175 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.74■□□□□ 0.27
PHGDHO43175 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 AC006277.1-201ENST00000624348 1610 ntBASIC16.74■□□□□ 0.27
PHGDHO43175 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PHGDHO43175 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PHGDHO43175 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.74■□□□□ 0.27
PHGDHO43175 HCG4P8-203ENST00000443049 980 ntBASIC16.74■□□□□ 0.27
PHGDHO43175 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.74■□□□□ 0.27
PHGDHO43175 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.74■□□□□ 0.27
PHGDHO43175 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PHGDHO43175 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.74■□□□□ 0.27
PHGDHO43175 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PHGDHO43175 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.73■□□□□ 0.27
PHGDHO43175 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PHGDHO43175 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.73■□□□□ 0.27
PHGDHO43175 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PHGDHO43175 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.73■□□□□ 0.27
PHGDHO43175 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.73■□□□□ 0.27
PHGDHO43175 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.73■□□□□ 0.27
PHGDHO43175 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.73■□□□□ 0.27
PHGDHO43175 HLA-J-202ENST00000469281 1241 ntBASIC16.73■□□□□ 0.27
PHGDHO43175 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 SART3-203ENST00000546611 1184 ntBASIC16.73■□□□□ 0.27
PHGDHO43175 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.73■□□□□ 0.27
PHGDHO43175 MIR3652-201ENST00000579335 131 ntBASIC16.73■□□□□ 0.27
PHGDHO43175 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.73■□□□□ 0.27
PHGDHO43175 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
PHGDHO43175 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
PHGDHO43175 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.73■□□□□ 0.27
PHGDHO43175 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PHGDHO43175 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PHGDHO43175 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.72■□□□□ 0.27
PHGDHO43175 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PHGDHO43175 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.72■□□□□ 0.27
PHGDHO43175 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PHGDHO43175 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms