Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DOC2GP-204ENST00000639052 2548 ntBASIC17.92■□□□□ 0.46
O00370 CICP6-201ENST00000457191 2729 ntBASIC17.92■□□□□ 0.46
O00370 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
O00370 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
O00370 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
O00370 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.91■□□□□ 0.46
O00370 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
O00370 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 PCDH8P1-201ENST00000428983 2773 ntBASIC17.91■□□□□ 0.46
O00370 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.91■□□□□ 0.46
O00370 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
O00370 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
O00370 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
O00370 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
O00370 PMS2P1-201ENST00000431037 1228 ntBASIC17.91■□□□□ 0.46
O00370 AC007967.2-201ENST00000432613 625 ntBASIC17.91■□□□□ 0.46
O00370 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
O00370 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.91■□□□□ 0.46
O00370 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.91■□□□□ 0.46
O00370 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.91■□□□□ 0.46
O00370 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
O00370 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
O00370 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.91■□□□□ 0.46
O00370 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.91■□□□□ 0.46
O00370 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.91■□□□□ 0.46
O00370 MIR4492-201ENST00000581627 80 ntBASIC17.91■□□□□ 0.46
O00370 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.91■□□□□ 0.46
O00370 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 AC064836.3-201ENST00000607928 673 ntBASIC17.91■□□□□ 0.46
O00370 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 AC010507.1-201ENST00000633895 436 ntBASIC17.91■□□□□ 0.46
O00370 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
O00370 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
O00370 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.91■□□□□ 0.46
O00370 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
O00370 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
O00370 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 AL353732.1-201ENST00000569618 1459 ntBASIC17.9■□□□□ 0.46
O00370 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
O00370 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
O00370 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.9■□□□□ 0.46
O00370 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
O00370 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
O00370 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 AP000347.1-202ENST00000435868 847 ntBASIC17.9■□□□□ 0.46
O00370 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.9■□□□□ 0.46
O00370 AP002490.2-201ENST00000524791 560 ntBASIC17.9■□□□□ 0.46
O00370 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.9■□□□□ 0.46
O00370 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.9■□□□□ 0.46
O00370 AC005412.3-201ENST00000580309 715 ntBASIC17.9■□□□□ 0.46
O00370 AC013467.2-201ENST00000605472 835 ntBASIC17.9■□□□□ 0.46
O00370 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.9■□□□□ 0.46
O00370 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.9■□□□□ 0.46
O00370 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
O00370 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
O00370 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
O00370 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
O00370 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
O00370 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
O00370 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
O00370 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms