Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC188H7C350 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC188H7C350 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCDC188H7C350 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC188H7C350 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC188H7C350 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC188H7C350 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC188H7C350 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC188H7C350 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.49■□□□□ 0.39
CCDC188H7C350 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC188H7C350 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC188H7C350 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 AL136038.3-201ENST00000561909 1096 ntBASIC17.49■□□□□ 0.39
CCDC188H7C350 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.49■□□□□ 0.39
CCDC188H7C350 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.49■□□□□ 0.39
CCDC188H7C350 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.49■□□□□ 0.39
CCDC188H7C350 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCDC188H7C350 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.49■□□□□ 0.39
CCDC188H7C350 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC188H7C350 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 SNX33P1-201ENST00000592116 1762 ntBASIC17.48■□□□□ 0.39
CCDC188H7C350 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CCDC188H7C350 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC188H7C350 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 HYMAI-201ENST00000635591 3347 ntBASIC17.48■□□□□ 0.39
CCDC188H7C350 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC188H7C350 CHCHD2P8-201ENST00000429873 447 ntBASIC17.48■□□□□ 0.39
CCDC188H7C350 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 NTF6B-201ENST00000591913 560 ntBASIC17.48■□□□□ 0.39
CCDC188H7C350 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.48■□□□□ 0.39
CCDC188H7C350 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.48■□□□□ 0.39
CCDC188H7C350 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.48■□□□□ 0.39
CCDC188H7C350 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CCDC188H7C350 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 AL671710.1-201ENST00000610245 2349 ntBASIC17.48■□□□□ 0.39
CCDC188H7C350 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC188H7C350 MST1L-201ENST00000442552 2185 ntBASIC17.47■□□□□ 0.39
CCDC188H7C350 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC188H7C350 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC188H7C350 AC126177.1-201ENST00000547829 2218 ntBASIC17.47■□□□□ 0.39
CCDC188H7C350 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC188H7C350 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms