Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TBC1D3FA6NER0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 SLC25A39P2-201ENST00000537614 270 ntBASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 AC124947.2-201ENST00000547118 1133 ntBASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 AC026150.2-201ENST00000564693 1156 ntBASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 AC005498.2-205ENST00000593218 784 ntBASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TBC1D3FA6NER0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 AL096865.1-201ENST00000606796 927 ntBASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TBC1D3FA6NER0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3FA6NER0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms