Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 LINC00895-201ENST00000629028 1637 ntBASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.75■□□□□ 0.75
PTPDC1A2A3K4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 MCCD1P2-201ENST00000423228 335 ntBASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 OR7E47P-204ENST00000575924 449 ntBASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 AC010507.1-201ENST00000633895 436 ntBASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
PTPDC1A2A3K4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 TNRC18P3-201ENST00000441896 2691 ntBASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 AC004967.1-201ENST00000453589 447 ntBASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 AC087163.2-201ENST00000457299 853 ntBASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 AC134684.3-201ENST00000641758 218 ntBASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PTPDC1A2A3K4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PTPDC1A2A3K4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms