Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.27■□□□□ 0.68
SSC5DA1L4H1 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 CROCCP2-202ENST00000412962 2773 ntBASIC19.27■□□□□ 0.67
SSC5DA1L4H1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.27■□□□□ 0.67
SSC5DA1L4H1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.26■□□□□ 0.67
SSC5DA1L4H1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC19.25■□□□□ 0.67
SSC5DA1L4H1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 AC093726.1-201ENST00000608064 963 ntBASIC19.25■□□□□ 0.67
SSC5DA1L4H1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSC5DA1L4H1 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 PCDHB17P-201ENST00000539533 2393 ntBASIC19.24■□□□□ 0.67
SSC5DA1L4H1 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 CROCCP4-201ENST00000457096 498 ntBASIC19.24■□□□□ 0.67
SSC5DA1L4H1 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 COX11-210ENST00000639671 696 ntBASIC19.24■□□□□ 0.67
SSC5DA1L4H1 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSC5DA1L4H1 AC092068.3-201ENST00000587894 2016 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms