Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 AL592071.1-201ENST00000611956 408 ntBASIC14.66□□□□□ -0.06
SHISA3A0PJX4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
SHISA3A0PJX4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AL031731.1-201ENST00000642131 2094 ntBASIC14.65□□□□□ -0.06
SHISA3A0PJX4 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 ACTG1P4-201ENST00000425123 1122 ntBASIC14.65□□□□□ -0.06
SHISA3A0PJX4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 YBX1P2-201ENST00000489612 999 ntBASIC14.65□□□□□ -0.06
SHISA3A0PJX4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AC139887.4-201ENST00000607877 719 ntBASIC14.65□□□□□ -0.06
SHISA3A0PJX4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHISA3A0PJX4 AC006058.4-201ENST00000624016 1670 ntBASIC14.65□□□□□ -0.06
SHISA3A0PJX4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHISA3A0PJX4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms