Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 STK25P1-201ENST00000585406 838 ntBASIC15.95■□□□□ 0.14
AP4S1Q9Y587 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
AP4S1Q9Y587 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 ID1-201ENST00000376105 1233 ntBASIC15.94■□□□□ 0.14
AP4S1Q9Y587 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 AP003733.1-201ENST00000491725 852 ntBASIC15.94■□□□□ 0.14
AP4S1Q9Y587 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 GCSHP2-201ENST00000560971 527 ntBASIC15.94■□□□□ 0.14
AP4S1Q9Y587 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.94■□□□□ 0.14
AP4S1Q9Y587 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 AC006058.4-201ENST00000624016 1670 ntBASIC15.93■□□□□ 0.14
AP4S1Q9Y587 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 AC103564.2-201ENST00000432853 1299 ntBASIC15.93■□□□□ 0.14
AP4S1Q9Y587 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 RASA4DP-201ENST00000460726 1199 ntBASIC15.93■□□□□ 0.14
AP4S1Q9Y587 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
AP4S1Q9Y587 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms