Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
RPH3AQ9Y2J0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPH3AQ9Y2J0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPH3AQ9Y2J0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.47■□□□□ 0.07
RPH3AQ9Y2J0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPH3AQ9Y2J0 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
RPH3AQ9Y2J0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RPH3AQ9Y2J0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RPH3AQ9Y2J0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 RPSAP43-201ENST00000402237 625 ntBASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 RNA5SP416-201ENST00000516838 111 ntBASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RPH3AQ9Y2J0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
RPH3AQ9Y2J0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RPH3AQ9Y2J0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
RPH3AQ9Y2J0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RPH3AQ9Y2J0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
RPH3AQ9Y2J0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
RPH3AQ9Y2J0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RPH3AQ9Y2J0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 PRSS29P-201ENST00000440800 595 ntBASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 AL591424.1-201ENST00000442569 1213 ntBASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 SLC25A6P2-201ENST00000497974 877 ntBASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 AC018845.2-201ENST00000568326 409 ntBASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 FAM197Y3-203ENST00000618346 717 ntBASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 AC007326.2-201ENST00000624224 7579 ntBASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RPH3AQ9Y2J0 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms