Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 AC007967.2-201ENST00000432613 625 ntBASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDHGC3Q9UN70 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 GPAA1P2-202ENST00000606848 1787 ntBASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 PMS2P4-201ENST00000412466 1052 ntBASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 AL591424.1-201ENST00000442569 1213 ntBASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 AL031055.1-201ENST00000606362 631 ntBASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 ALOX12P2-203ENST00000570921 1945 ntBASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PCDHGC3Q9UN70 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 AC027601.4-201ENST00000611259 610 ntBASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 FAM197Y3-203ENST00000618346 717 ntBASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 AC004877.2-201ENST00000623941 599 ntBASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCDHGC3Q9UN70 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms