Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 AL671710.1-201ENST00000610245 2349 ntBASIC21.13■□□□□ 0.97
CCNL1Q9UK58 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.13■□□□□ 0.97
CCNL1Q9UK58 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 KRT8P12-202ENST00000472924 1397 ntBASIC21.12■□□□□ 0.97
CCNL1Q9UK58 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 FTH1-202ENST00000526640 786 ntTSL 2 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 IMPDH1P4-201ENST00000445028 1534 ntBASIC21.12■□□□□ 0.97
CCNL1Q9UK58 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCNL1Q9UK58 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 SLC25A6P5-201ENST00000435663 894 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 BNIP3P42-201ENST00000454982 569 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 MIR4538-201ENST00000581377 78 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 AC008735.3-201ENST00000596646 500 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 BNIP3P29-201ENST00000598302 571 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 AC093726.1-201ENST00000608064 963 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 WFDC1-204ENST00000613603 549 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 AC011447.5-201ENST00000616168 564 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 AL109936.8-201ENST00000641772 604 ntBASIC21.11■□□□□ 0.97
CCNL1Q9UK58 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CCNL1Q9UK58 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 AL133338.1-201ENST00000565695 1517 ntBASIC21.1■□□□□ 0.97
CCNL1Q9UK58 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 CROCCP4-201ENST00000457096 498 ntBASIC21.1■□□□□ 0.97
CCNL1Q9UK58 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CCNL1Q9UK58 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms