Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
UBQLN2Q9UHD9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 AC022898.2-201ENST00000616822 1312 ntBASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.26□□□□□ -0.13
UBQLN2Q9UHD9 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 KRT8P11-201ENST00000409686 1436 ntBASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 AC139749.1-202ENST00000617529 3139 ntBASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 MIR149-201ENST00000384879 89 ntBASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 FITM1-202ENST00000559294 800 ntBASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
UBQLN2Q9UHD9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms