Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIP2Q9UDT6 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 AC091812.2-201ENST00000619081 385 ntBASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 AC106886.4-201ENST00000623557 2502 ntBASIC19.91■□□□□ 0.78
CLIP2Q9UDT6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 AP006288.1-201ENST00000446065 395 ntBASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 AP002472.1-201ENST00000577490 586 ntBASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 AC068137.2-201ENST00000605408 478 ntBASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 AC008894.3-201ENST00000624324 3103 ntBASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.9■□□□□ 0.78
CLIP2Q9UDT6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms