Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 AL031432.2-201ENST00000566714 459 ntBASIC14.18□□□□□ -0.14
RNF7Q9UBF6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 AL928711.1-201ENST00000570165 459 ntBASIC14.18□□□□□ -0.14
RNF7Q9UBF6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 MIR4492-201ENST00000581627 80 ntBASIC14.18□□□□□ -0.14
RNF7Q9UBF6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.18□□□□□ -0.14
RNF7Q9UBF6 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 AC004877.2-201ENST00000623941 599 ntBASIC14.18□□□□□ -0.14
RNF7Q9UBF6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RNF7Q9UBF6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 SLC22A20-204ENST00000530038 1673 ntBASIC14.17□□□□□ -0.14
RNF7Q9UBF6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.17□□□□□ -0.14
RNF7Q9UBF6 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.17□□□□□ -0.14
RNF7Q9UBF6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 AP000347.1-202ENST00000435868 847 ntBASIC14.17□□□□□ -0.14
RNF7Q9UBF6 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 POLD2P1-201ENST00000511220 997 ntBASIC14.17□□□□□ -0.14
RNF7Q9UBF6 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 CYP2A7P1-201ENST00000595391 815 ntBASIC14.17□□□□□ -0.14
RNF7Q9UBF6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 AC022211.2-201ENST00000585075 2527 ntBASIC14.17□□□□□ -0.14
RNF7Q9UBF6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RNF7Q9UBF6 PMS2P7-201ENST00000506558 1336 ntBASIC14.16□□□□□ -0.14
RNF7Q9UBF6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 AC025580.3-201ENST00000617932 1424 ntBASIC14.16□□□□□ -0.14
RNF7Q9UBF6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 AL645728.1-201ENST00000366221 2101 ntBASIC14.16□□□□□ -0.14
RNF7Q9UBF6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 AC040169.1-201ENST00000565382 521 ntBASIC14.16□□□□□ -0.14
RNF7Q9UBF6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
RNF7Q9UBF6 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms