Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKIPSDQ9NZQ3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 AC055717.3-201ENST00000622967 595 ntBASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
NCKIPSDQ9NZQ3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 MCCD1P2-201ENST00000423228 335 ntBASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 AC124947.2-201ENST00000547118 1133 ntBASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 AC004817.3-201ENST00000602957 2129 ntBASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 AC008667.4-201ENST00000607370 168 ntBASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 AC132938.5-201ENST00000624980 1813 ntBASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.04■□□□□ 0.32
NCKIPSDQ9NZQ3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NCKIPSDQ9NZQ3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms