Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.31■□□□□ 0.68
LMBRD1Q9NUN5 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 LINC02447-202ENST00000501888 2146 ntBASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 TERF1P1-201ENST00000311003 1181 ntBASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 RNF152P1-201ENST00000397754 604 ntBASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 AP005901.3-202ENST00000581653 237 ntBASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 IGHV3-41-201ENST00000613121 348 ntBASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMBRD1Q9NUN5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 AC246785.2-201ENST00000432512 513 ntBASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 SIGLEC30P-201ENST00000455569 941 ntBASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 AC090616.6-201ENST00000582640 721 ntBASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 TERC-201ENST00000602385 541 ntBASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 AC097637.2-201ENST00000624096 1997 ntBASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 AC243591.1-201ENST00000452967 1364 ntBASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMBRD1Q9NUN5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 AC113347.1-201ENST00000413321 391 ntBASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.28■□□□□ 0.68
LMBRD1Q9NUN5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms