Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC8.54□□□□□ -1.04
CDC42SE1Q9NRR8 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 AL596087.1-201ENST00000400979 1969 ntBASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 AC148477.4-201ENST00000613430 1793 ntBASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 NFYC-AS1-201ENST00000606277 1687 ntBASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 AP005435.1-201ENST00000529293 1178 ntBASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 FAM21FP-204ENST00000608637 956 ntBASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 LINC01971-201ENST00000617888 1048 ntBASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 AC092117.1-201ENST00000621230 3250 ntBASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 C18orf15-201ENST00000623680 2534 ntBASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CDC42SE1Q9NRR8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
CDC42SE1Q9NRR8 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CDC42SE1Q9NRR8 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms