Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 LINC00895-201ENST00000629028 1637 ntBASIC17.73■□□□□ 0.43
TLR9Q9NR96 AC093525.9-201ENST00000624961 1746 ntBASIC17.73■□□□□ 0.43
TLR9Q9NR96 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 SLC25A6P5-201ENST00000435663 894 ntBASIC17.73■□□□□ 0.43
TLR9Q9NR96 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 AC139713.2-201ENST00000641328 2723 ntBASIC17.73■□□□□ 0.43
TLR9Q9NR96 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TLR9Q9NR96 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.73■□□□□ 0.43
TLR9Q9NR96 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 AL035456.1-201ENST00000456064 1369 ntBASIC17.72■□□□□ 0.43
TLR9Q9NR96 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 HLA-H-201ENST00000383620 1096 ntBASIC17.72■□□□□ 0.43
TLR9Q9NR96 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 KRT17P7-201ENST00000451704 1104 ntBASIC17.72■□□□□ 0.43
TLR9Q9NR96 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TLR9Q9NR96 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.72■□□□□ 0.43
TLR9Q9NR96 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 AL353705.2-201ENST00000428243 662 ntBASIC17.71■□□□□ 0.43
TLR9Q9NR96 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.71■□□□□ 0.43
TLR9Q9NR96 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 PRYP6-201ENST00000514804 343 ntBASIC17.71■□□□□ 0.43
TLR9Q9NR96 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TLR9Q9NR96 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 AC016396.2-201ENST00000562575 1417 ntBASIC17.71■□□□□ 0.43
TLR9Q9NR96 CU639417.3-201ENST00000624240 1404 ntBASIC17.71■□□□□ 0.43
TLR9Q9NR96 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
TLR9Q9NR96 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TLR9Q9NR96 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TLR9Q9NR96 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.7■□□□□ 0.42
TLR9Q9NR96 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms