Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 CROCCP1-201ENST00000426910 5675 ntBASIC15.91■□□□□ 0.14
PRDM9Q9NQV7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRDM9Q9NQV7 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRDM9Q9NQV7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRDM9Q9NQV7 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PRDM9Q9NQV7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.91■□□□□ 0.14
PRDM9Q9NQV7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 AC078925.2-201ENST00000624013 1973 ntBASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 AL645728.1-201ENST00000366221 2101 ntBASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 AL513480.1-201ENST00000451731 511 ntBASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 AC023141.13-201ENST00000604991 943 ntBASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
PRDM9Q9NQV7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 AC006538.1-201ENST00000567905 1585 ntBASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 AC002347.1-201ENST00000569543 541 ntBASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 AC004877.2-201ENST00000623941 599 ntBASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 BCAR1-209ENST00000546196 1340 ntBASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 AC106886.4-201ENST00000623557 2502 ntBASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PRDM9Q9NQV7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PRDM9Q9NQV7 AC131009.4-201ENST00000624048 1740 ntBASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms