Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 PDPK2P-202ENST00000562415 1191 ntBASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 AC006277.1-201ENST00000624348 1610 ntBASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC4Q9HBW1 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 AL391256.1-201ENST00000443260 1855 ntBASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 AC074386.1-202ENST00000463561 864 ntBASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 MIR4492-201ENST00000581627 80 ntBASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 AC013467.2-201ENST00000605472 835 ntBASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 LINC00895-201ENST00000629028 1637 ntBASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 AC022211.2-201ENST00000585075 2527 ntBASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC4Q9HBW1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
LRRC4Q9HBW1 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC4Q9HBW1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.71■□□□□ 0.42
LRRC4Q9HBW1 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC4Q9HBW1 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC4Q9HBW1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC4Q9HBW1 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.42
LRRC4Q9HBW1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 AL645728.1-201ENST00000366221 2101 ntBASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 HMGA1P7-201ENST00000406908 502 ntBASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 AC004832.2-201ENST00000426397 482 ntBASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 CYP2A7P1-201ENST00000595391 815 ntBASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC4Q9HBW1 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms