Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 NCF1C-201ENST00000438382 1427 ntBASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 C8orf49-201ENST00000525043 1968 ntBASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 CYP2T1P-202ENST00000641596 2535 ntBASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.44■□□□□ 0.22
CLK4Q9HAZ1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 AC005915.1-201ENST00000624912 2018 ntBASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 AC132872.4-202ENST00000622924 2756 ntBASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 AC018712.1-201ENST00000455767 687 ntBASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 AC107918.4-202ENST00000641623 219 ntBASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 AC092850.2-201ENST00000623821 2697 ntBASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 AL513523.2-202ENST00000427283 2040 ntBASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.43■□□□□ 0.22
CLK4Q9HAZ1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 AC006557.2-201ENST00000592985 1240 ntBASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 AC025062.2-201ENST00000605477 670 ntBASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 AL773604.1-201ENST00000617417 272 ntBASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLK4Q9HAZ1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLK4Q9HAZ1 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms