Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 AC068587.6-202ENST00000641839 5619 ntBASIC15.51■□□□□ 0.07
TRIM2Q9C040 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM2Q9C040 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM2Q9C040 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 MRPL3P1-201ENST00000400109 1033 ntBASIC15.5■□□□□ 0.07
TRIM2Q9C040 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 HLA-J-202ENST00000469281 1241 ntBASIC15.5■□□□□ 0.07
TRIM2Q9C040 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 SART3-203ENST00000546611 1184 ntBASIC15.5■□□□□ 0.07
TRIM2Q9C040 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 HLA-A-202ENST00000376806 1854 ntBASIC15.5■□□□□ 0.07
TRIM2Q9C040 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRIM2Q9C040 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM2Q9C040 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.49■□□□□ 0.07
TRIM2Q9C040 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 AC013467.2-201ENST00000605472 835 ntBASIC15.49■□□□□ 0.07
TRIM2Q9C040 AC004706.3-202ENST00000621574 984 ntBASIC15.49■□□□□ 0.07
TRIM2Q9C040 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM2Q9C040 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM2Q9C040 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms