Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 AC008267.7-201ENST00000624570 1194 ntBASIC16.07■□□□□ 0.16
CMKLR1Q99788 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CMKLR1Q99788 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CMKLR1Q99788 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 RNU1-129P-201ENST00000384064 167 ntBASIC16.06■□□□□ 0.16
CMKLR1Q99788 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 IGHV3-42-201ENST00000520410 361 ntBASIC16.06■□□□□ 0.16
CMKLR1Q99788 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 U1.21-201ENST00000580816 167 ntBASIC16.06■□□□□ 0.16
CMKLR1Q99788 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CMKLR1Q99788 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CMKLR1Q99788 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 AC008677.1-201ENST00000519230 1561 ntBASIC16.05■□□□□ 0.16
CMKLR1Q99788 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CMKLR1Q99788 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMKLR1Q99788 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMKLR1Q99788 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMKLR1Q99788 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 SPDYE14P-201ENST00000442619 822 ntBASIC16.05■□□□□ 0.16
CMKLR1Q99788 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CMKLR1Q99788 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 TERF1P3-201ENST00000505638 1227 ntBASIC16.05■□□□□ 0.16
CMKLR1Q99788 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CMKLR1Q99788 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CMKLR1Q99788 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CMKLR1Q99788 MIR6080-201ENST00000617359 66 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms