Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASD1Q96PB1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASD1Q96PB1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CASD1Q96PB1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASD1Q96PB1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 RNA5SP410-201ENST00000516285 106 ntBASIC17.77■□□□□ 0.44
CASD1Q96PB1 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 AC027307.3-201ENST00000594262 1100 ntBASIC17.77■□□□□ 0.44
CASD1Q96PB1 AL133215.2-201ENST00000609242 977 ntBASIC17.77■□□□□ 0.44
CASD1Q96PB1 AC008738.7-201ENST00000609744 511 ntBASIC17.77■□□□□ 0.44
CASD1Q96PB1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASD1Q96PB1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASD1Q96PB1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CASD1Q96PB1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
CASD1Q96PB1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASD1Q96PB1 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CASD1Q96PB1 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.43
CASD1Q96PB1 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
CASD1Q96PB1 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
CASD1Q96PB1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 AC004233.3-201ENST00000607794 1269 ntBASIC17.76■□□□□ 0.43
CASD1Q96PB1 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASD1Q96PB1 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CASD1Q96PB1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 AC018470.1-201ENST00000624790 3129 ntBASIC17.75■□□□□ 0.43
CASD1Q96PB1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 AL596325.1-201ENST00000563991 1082 ntBASIC17.75■□□□□ 0.43
CASD1Q96PB1 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.75■□□□□ 0.43
CASD1Q96PB1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASD1Q96PB1 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms