Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 PGAM5P1-201ENST00000518923 814 ntBASIC17.38■□□□□ 0.37
IFT43Q96FT9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.38■□□□□ 0.37
IFT43Q96FT9 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
IFT43Q96FT9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IFT43Q96FT9 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 MED15P5-201ENST00000423150 992 ntBASIC17.37■□□□□ 0.37
IFT43Q96FT9 KRT18P27-201ENST00000427733 1299 ntBASIC17.37■□□□□ 0.37
IFT43Q96FT9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 AC092865.5-201ENST00000545435 363 ntBASIC17.37■□□□□ 0.37
IFT43Q96FT9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 AL353135.1-201ENST00000606729 504 ntBASIC17.37■□□□□ 0.37
IFT43Q96FT9 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 MIR1199-201ENST00000621445 119 ntBASIC17.37■□□□□ 0.37
IFT43Q96FT9 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IFT43Q96FT9 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.37■□□□□ 0.37
IFT43Q96FT9 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
IFT43Q96FT9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.36■□□□□ 0.37
IFT43Q96FT9 MIR940-201ENST00000401276 94 ntBASIC17.36■□□□□ 0.37
IFT43Q96FT9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms