Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM54Q969K7 AC120114.3-201ENST00000611923 658 ntBASIC14.79□□□□□ -0.04
TMEM54Q969K7 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
TMEM54Q969K7 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
TMEM54Q969K7 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.79□□□□□ -0.04
TMEM54Q969K7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEM54Q969K7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEM54Q969K7 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.79□□□□□ -0.04
TMEM54Q969K7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM54Q969K7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM54Q969K7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
TMEM54Q969K7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 SLC25A1P1-201ENST00000528351 927 ntBASIC14.78□□□□□ -0.04
TMEM54Q969K7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 AC106730.1-201ENST00000566722 1090 ntBASIC14.78□□□□□ -0.04
TMEM54Q969K7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 AC007064.4-201ENST00000637740 555 ntBASIC14.78□□□□□ -0.04
TMEM54Q969K7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 AL031731.1-201ENST00000642131 2094 ntBASIC14.78□□□□□ -0.04
TMEM54Q969K7 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TMEM54Q969K7 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TMEM54Q969K7 GGT4P-201ENST00000623672 1708 ntBASIC14.78□□□□□ -0.04
TMEM54Q969K7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TMEM54Q969K7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEM54Q969K7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.77□□□□□ -0.04
TMEM54Q969K7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
TMEM54Q969K7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TMEM54Q969K7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.77□□□□□ -0.04
TMEM54Q969K7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TMEM54Q969K7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TMEM54Q969K7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 AC023141.13-201ENST00000604991 943 ntBASIC14.77□□□□□ -0.05
TMEM54Q969K7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TMEM54Q969K7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TMEM54Q969K7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM54Q969K7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TMEM54Q969K7 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM54Q969K7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TMEM54Q969K7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.76□□□□□ -0.05
TMEM54Q969K7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TMEM54Q969K7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms