Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 SRD5A3P1-201ENST00000603021 949 ntBASIC20.36■□□□□ 0.85
CNKSR1Q969H4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNKSR1Q969H4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 AC092658.1-201ENST00000505836 891 ntBASIC20.35■□□□□ 0.85
CNKSR1Q969H4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNKSR1Q969H4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 MYCLP2-201ENST00000449268 967 ntBASIC20.34■□□□□ 0.85
CNKSR1Q969H4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 TPRX2P-201ENST00000535362 881 ntBASIC20.34■□□□□ 0.85
CNKSR1Q969H4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 AL512343.1-201ENST00000605837 169 ntBASIC20.34■□□□□ 0.85
CNKSR1Q969H4 AC099568.2-201ENST00000609194 695 ntBASIC20.34■□□□□ 0.85
CNKSR1Q969H4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.34■□□□□ 0.85
CNKSR1Q969H4 AL033527.5-202ENST00000641632 1098 ntBASIC20.34■□□□□ 0.85
CNKSR1Q969H4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC20.34■□□□□ 0.85
CNKSR1Q969H4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 SDHAP3-202ENST00000515467 728 ntBASIC20.33■□□□□ 0.85
CNKSR1Q969H4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.33■□□□□ 0.85
CNKSR1Q969H4 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms