Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC131009.4-201ENST00000624048 1740 ntBASIC18.63■□□□□ 0.57
HPS3Q969F9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS3Q969F9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HPS3Q969F9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HPS3Q969F9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS3Q969F9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
HPS3Q969F9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HPS3Q969F9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HPS3Q969F9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
HPS3Q969F9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HPS3Q969F9 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.62■□□□□ 0.57
HPS3Q969F9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.62■□□□□ 0.57
HPS3Q969F9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS3Q969F9 ACTL9-202ENST00000612068 1252 ntBASIC18.62■□□□□ 0.57
HPS3Q969F9 PGM5P2-202ENST00000637225 1043 ntBASIC18.62■□□□□ 0.57
HPS3Q969F9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS3Q969F9 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.62■□□□□ 0.57
HPS3Q969F9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS3Q969F9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 AL512652.2-201ENST00000625156 1716 ntBASIC18.62■□□□□ 0.57
HPS3Q969F9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS3Q969F9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS3Q969F9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS3Q969F9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
HPS3Q969F9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.62■□□□□ 0.57
HPS3Q969F9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HPS3Q969F9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.61■□□□□ 0.57
HPS3Q969F9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 AC006538.1-201ENST00000567905 1585 ntBASIC18.61■□□□□ 0.57
HPS3Q969F9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.61■□□□□ 0.57
HPS3Q969F9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.61■□□□□ 0.57
HPS3Q969F9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.61■□□□□ 0.57
HPS3Q969F9 IGLL3P-201ENST00000412472 434 ntBASIC18.61■□□□□ 0.57
HPS3Q969F9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HPS3Q969F9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
HPS3Q969F9 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.61■□□□□ 0.57
HPS3Q969F9 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.61■□□□□ 0.57
HPS3Q969F9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.61■□□□□ 0.57
HPS3Q969F9 AL662844.1-201ENST00000546340 181 ntBASIC18.61■□□□□ 0.57
HPS3Q969F9 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.61■□□□□ 0.57
HPS3Q969F9 MIR4751-201ENST00000578027 74 ntBASIC18.61■□□□□ 0.57
HPS3Q969F9 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.61■□□□□ 0.57
HPS3Q969F9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HPS3Q969F9 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.61■□□□□ 0.57
HPS3Q969F9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HPS3Q969F9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.61■□□□□ 0.57
HPS3Q969F9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.61■□□□□ 0.57
HPS3Q969F9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HPS3Q969F9 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
HPS3Q969F9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.6■□□□□ 0.57
HPS3Q969F9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HPS3Q969F9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
HPS3Q969F9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HPS3Q969F9 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HPS3Q969F9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HPS3Q969F9 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS3Q969F9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HPS3Q969F9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.6■□□□□ 0.57
HPS3Q969F9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
HPS3Q969F9 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS3Q969F9 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS3Q969F9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.6■□□□□ 0.57
HPS3Q969F9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.6■□□□□ 0.57
HPS3Q969F9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HPS3Q969F9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms