Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 POM121L3P-201ENST00000419331 1163 ntBASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 AC099336.1-202ENST00000602961 463 ntBASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 AL596257.1-201ENST00000641463 2694 ntBASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RTN4IP1Q8WWV3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 AC114341.1-201ENST00000618070 349 ntBASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
RTN4IP1Q8WWV3 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
RTN4IP1Q8WWV3 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RTN4IP1Q8WWV3 INTS4P1-201ENST00000438455 1935 ntBASIC14.21□□□□□ -0.14
RTN4IP1Q8WWV3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.21□□□□□ -0.14
RTN4IP1Q8WWV3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RTN4IP1Q8WWV3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RTN4IP1Q8WWV3 FRMD8P1-201ENST00000440433 1524 ntBASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 RCN1P2-201ENST00000398357 915 ntBASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 KRT8P10-201ENST00000450021 1447 ntBASIC14.2□□□□□ -0.14
RTN4IP1Q8WWV3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms