Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 AL359075.1-203ENST00000462729 1002 ntBASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 AC092597.1-201ENST00000487352 616 ntBASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 AC006011.2-201ENST00000621313 1158 ntBASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
RFWD2Q8NHY2 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 AC111152.3-201ENST00000569699 673 ntBASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RFWD2Q8NHY2 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 AL136379.1-201ENST00000623471 2642 ntBASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 RNF152P1-201ENST00000397754 604 ntBASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 RCN1P1-201ENST00000400413 996 ntBASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 TMPOP1-202ENST00000424642 1267 ntBASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 TSPY5P-201ENST00000426936 936 ntBASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 AC104076.2-201ENST00000448912 469 ntBASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 DUX4L17-201ENST00000557360 1267 ntBASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 ZNF444P1-201ENST00000559497 298 ntBASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RFWD2Q8NHY2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms