Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
HIPK4Q8NE63 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 AC002558.1-201ENST00000488906 803 ntBASIC16.4■□□□□ 0.22
HIPK4Q8NE63 YBX1P2-201ENST00000489612 999 ntBASIC16.4■□□□□ 0.22
HIPK4Q8NE63 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 AC139887.4-201ENST00000607877 719 ntBASIC16.4■□□□□ 0.22
HIPK4Q8NE63 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.4■□□□□ 0.22
HIPK4Q8NE63 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
HIPK4Q8NE63 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
HIPK4Q8NE63 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.39■□□□□ 0.22
HIPK4Q8NE63 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 AC113347.1-201ENST00000413321 391 ntBASIC16.39■□□□□ 0.21
HIPK4Q8NE63 AL137013.1-201ENST00000432946 1228 ntBASIC16.39■□□□□ 0.21
HIPK4Q8NE63 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 AL391256.1-201ENST00000443260 1855 ntBASIC16.39■□□□□ 0.21
HIPK4Q8NE63 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HIPK4Q8NE63 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HIPK4Q8NE63 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms