Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SIMC1Q8NDZ2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 AL645728.1-201ENST00000366221 2101 ntBASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 AL022342.1-201ENST00000400363 863 ntBASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 AC136632.2-201ENST00000512891 861 ntBASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 AL805961.1-202ENST00000641562 540 ntBASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SIMC1Q8NDZ2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 AC087163.2-201ENST00000457299 853 ntBASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 SLC25A6P2-201ENST00000497974 877 ntBASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 AP001005.1-201ENST00000571755 1248 ntBASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SIMC1Q8NDZ2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SIMC1Q8NDZ2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms