Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIML2Q8N7C3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIML2Q8N7C3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
TRIML2Q8N7C3 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIML2Q8N7C3 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRIML2Q8N7C3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
TRIML2Q8N7C3 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.35■□□□□ 0.21
TRIML2Q8N7C3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 AL662844.4-201ENST00000606367 2838 ntBASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 SLC25A1P3-201ENST00000395415 828 ntBASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 STK19B-204ENST00000512515 211 ntBASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 RN7SL850P-201ENST00000579959 291 ntBASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 KRT8P10-201ENST00000450021 1447 ntBASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 DBET-201ENST00000630918 3363 ntBASIC16.34■□□□□ 0.21
TRIML2Q8N7C3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRIML2Q8N7C3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 AC003669.1-201ENST00000334569 611 ntBASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 TMPOP1-202ENST00000424642 1267 ntBASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 BX276092.5-203ENST00000456199 560 ntBASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 AL121672.3-201ENST00000608644 468 ntBASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 AL353593.2-201ENST00000602529 1483 ntBASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 EGFEM1P-202ENST00000431685 1563 ntBASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 AC024909.3-201ENST00000611513 2257 ntBASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRIML2Q8N7C3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRIML2Q8N7C3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIML2Q8N7C3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIML2Q8N7C3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRIML2Q8N7C3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms