Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 BX276092.5-203ENST00000456199 560 ntBASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 AC022616.7-201ENST00000525383 220 ntBASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 AC073592.4-201ENST00000623827 446 ntBASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LINC01561Q8N1V8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 AC097637.2-201ENST00000624096 1997 ntBASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 TOP3BP1-201ENST00000420768 1380 ntBASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 AC132872.4-202ENST00000622924 2756 ntBASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 LINC00982-205ENST00000420957 435 ntBASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 POU5F1P6-201ENST00000466990 990 ntBASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 AC010331.1-201ENST00000611423 582 ntBASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC01561Q8N1V8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC01561Q8N1V8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms