Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC170Q8IYT3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC170Q8IYT3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC170Q8IYT3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC170Q8IYT3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC170Q8IYT3 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC170Q8IYT3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 POM121L3P-201ENST00000419331 1163 ntBASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 IGHV3-47-201ENST00000425060 335 ntBASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCDC170Q8IYT3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 AC079776.2-201ENST00000641154 1609 ntBASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 AC005332.1-201ENST00000577698 1310 ntBASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 TPSP2-201ENST00000561760 610 ntBASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 AL353135.1-201ENST00000606729 504 ntBASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 AC010331.1-201ENST00000611423 582 ntBASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.09■□□□□ 0.49
CCDC170Q8IYT3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC170Q8IYT3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC170Q8IYT3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC170Q8IYT3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC170Q8IYT3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCDC170Q8IYT3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.08■□□□□ 0.49
CCDC170Q8IYT3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
CCDC170Q8IYT3 TOP3BP1-201ENST00000420768 1380 ntBASIC18.08■□□□□ 0.49
CCDC170Q8IYT3 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 AL031133.1-201ENST00000406807 723 ntBASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 ABCD1P5-201ENST00000445663 754 ntBASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 TSSC2-201ENST00000450217 709 ntBASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 SNX33P1-201ENST00000592116 1762 ntBASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC170Q8IYT3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms