Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 AC003669.1-201ENST00000334569 611 ntBASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 AC125634.1-201ENST00000438758 1403 ntBASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 LINC00895-201ENST00000629028 1637 ntBASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRIM42Q8IWZ5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 AC092597.1-201ENST00000487352 616 ntBASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 AL021920.2-201ENST00000624828 1351 ntBASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRIM42Q8IWZ5 NORAD-201ENST00000565493 5339 ntBASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRIM42Q8IWZ5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRIM42Q8IWZ5 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms