Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 SLC25A39P2-201ENST00000537614 270 ntBASIC18.7■□□□□ 0.58
TRIM50Q86XT4 SPCS2P1-201ENST00000561636 679 ntBASIC18.7■□□□□ 0.58
TRIM50Q86XT4 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 AC011467.4-201ENST00000594891 528 ntBASIC18.7■□□□□ 0.58
TRIM50Q86XT4 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 AP001350.2-201ENST00000625104 1094 ntBASIC18.7■□□□□ 0.58
TRIM50Q86XT4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRIM50Q86XT4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 AC139713.2-201ENST00000641328 2723 ntBASIC18.69■□□□□ 0.58
TRIM50Q86XT4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 FAM8A3P-201ENST00000427218 844 ntBASIC18.69■□□□□ 0.58
TRIM50Q86XT4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 SPDYE14P-201ENST00000442619 822 ntBASIC18.69■□□□□ 0.58
TRIM50Q86XT4 BCRP1-201ENST00000444246 691 ntBASIC18.69■□□□□ 0.58
TRIM50Q86XT4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 AL138918.1-201ENST00000568306 659 ntBASIC18.69■□□□□ 0.58
TRIM50Q86XT4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 MIR3909-201ENST00000579518 119 ntBASIC18.69■□□□□ 0.58
TRIM50Q86XT4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.69■□□□□ 0.58
TRIM50Q86XT4 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 LINC00895-201ENST00000629028 1637 ntBASIC18.68■□□□□ 0.58
TRIM50Q86XT4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.68■□□□□ 0.58
TRIM50Q86XT4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 PMS2P4-201ENST00000412466 1052 ntBASIC18.68■□□□□ 0.58
TRIM50Q86XT4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 AC015911.4-201ENST00000588022 1070 ntBASIC18.68■□□□□ 0.58
TRIM50Q86XT4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 AP001059.3-201ENST00000619053 235 ntBASIC18.68■□□□□ 0.58
TRIM50Q86XT4 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 AL671710.1-201ENST00000610245 2349 ntBASIC18.68■□□□□ 0.58
TRIM50Q86XT4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms