Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LRRC28Q86X40 POM121L3P-201ENST00000419331 1163 ntBASIC15.03■□□□□ -0
LRRC28Q86X40 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.03■□□□□ -0
LRRC28Q86X40 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.03■□□□□ -0
LRRC28Q86X40 AC112698.1-201ENST00000510299 916 ntBASIC15.03■□□□□ -0
LRRC28Q86X40 FOSL1P1-201ENST00000511041 816 ntBASIC15.03■□□□□ -0
LRRC28Q86X40 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.03■□□□□ -0
LRRC28Q86X40 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.03■□□□□ -0
LRRC28Q86X40 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.03■□□□□ -0
LRRC28Q86X40 AC099336.1-202ENST00000602961 463 ntBASIC15.03■□□□□ -0
LRRC28Q86X40 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.03■□□□□ -0
LRRC28Q86X40 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
LRRC28Q86X40 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.03■□□□□ -0
LRRC28Q86X40 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
LRRC28Q86X40 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
LRRC28Q86X40 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.03■□□□□ -0
LRRC28Q86X40 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.03■□□□□ -0
LRRC28Q86X40 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.03■□□□□ -0
LRRC28Q86X40 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRRC28Q86X40 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRC28Q86X40 MTHFR-217ENST00000641820 1569 ntBASIC15.02■□□□□ -0
LRRC28Q86X40 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRC28Q86X40 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.02■□□□□ -0
LRRC28Q86X40 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.02■□□□□ -0
LRRC28Q86X40 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRRC28Q86X40 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRRC28Q86X40 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
LRRC28Q86X40 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRRC28Q86X40 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRRC28Q86X40 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
LRRC28Q86X40 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LRRC28Q86X40 KRT16P4-201ENST00000453883 522 ntBASIC15.02■□□□□ -0
LRRC28Q86X40 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.02■□□□□ -0
LRRC28Q86X40 AC002558.1-201ENST00000488906 803 ntBASIC15.02■□□□□ -0
LRRC28Q86X40 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.02■□□□□ -0
LRRC28Q86X40 AC091304.2-201ENST00000564639 760 ntBASIC15.02■□□□□ -0
LRRC28Q86X40 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.02■□□□□ -0
LRRC28Q86X40 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.02■□□□□ -0
LRRC28Q86X40 AL691432.3-201ENST00000621860 400 ntBASIC15.02■□□□□ -0
LRRC28Q86X40 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.02□□□□□ -0.01
LRRC28Q86X40 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LRRC28Q86X40 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.02□□□□□ -0.01
LRRC28Q86X40 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRRC28Q86X40 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 HLA-A-202ENST00000376806 1854 ntBASIC15.01□□□□□ -0.01
LRRC28Q86X40 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 LINC01711-201ENST00000598340 967 ntBASIC15.01□□□□□ -0.01
LRRC28Q86X40 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRRC28Q86X40 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.01□□□□□ -0.01
LRRC28Q86X40 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms