Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 LINC02199-201ENST00000506655 2702 ntBASIC20.76■□□□□ 0.91
CHD1LQ86WJ1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 AL353732.1-201ENST00000569618 1459 ntBASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 AC105339.3-201ENST00000560043 636 ntBASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 BSG-214ENST00000614867 960 ntTSL 3 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.75■□□□□ 0.91
CHD1LQ86WJ1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 KRT18P67-201ENST00000432816 1264 ntBASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 AC079781.3-201ENST00000449110 356 ntBASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 AC129492.6-201ENST00000611383 1305 ntBASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CHD1LQ86WJ1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 PCDHA1-201ENST00000378133 2726 ntBASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 OR7E47P-204ENST00000575924 449 ntBASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC20.73■□□□□ 0.91
CHD1LQ86WJ1 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms