Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.83■□□□□ 0.28
USP45Q70EL2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP45Q70EL2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.83■□□□□ 0.28
USP45Q70EL2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.83■□□□□ 0.28
USP45Q70EL2 MIR3687-2-201ENST00000577708 61 ntBASIC16.83■□□□□ 0.28
USP45Q70EL2 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.83■□□□□ 0.28
USP45Q70EL2 MIR3687-1-201ENST00000614492 61 ntBASIC16.83■□□□□ 0.28
USP45Q70EL2 AC023511.2-201ENST00000618803 211 ntBASIC16.83■□□□□ 0.28
USP45Q70EL2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.83■□□□□ 0.28
USP45Q70EL2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
USP45Q70EL2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.83■□□□□ 0.28
USP45Q70EL2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
USP45Q70EL2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
USP45Q70EL2 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP45Q70EL2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
USP45Q70EL2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.83■□□□□ 0.28
USP45Q70EL2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.83■□□□□ 0.28
USP45Q70EL2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 AL645728.1-201ENST00000366221 2101 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 RNU1-129P-201ENST00000384064 167 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 AC112191.1-201ENST00000523689 701 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.82■□□□□ 0.28
USP45Q70EL2 U1.21-201ENST00000580816 167 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 AL031055.1-201ENST00000606362 631 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 C20orf181-201ENST00000623918 480 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 AL139011.1-202ENST00000642063 584 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 AC080080.1-201ENST00000625121 2420 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.82■□□□□ 0.28
USP45Q70EL2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
USP45Q70EL2 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
USP45Q70EL2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
USP45Q70EL2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
USP45Q70EL2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
USP45Q70EL2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.81■□□□□ 0.28
USP45Q70EL2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.81■□□□□ 0.28
USP45Q70EL2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.81■□□□□ 0.28
USP45Q70EL2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
USP45Q70EL2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
USP45Q70EL2 AC002056.1-201ENST00000395613 760 ntBASIC16.81■□□□□ 0.28
USP45Q70EL2 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.81■□□□□ 0.28
USP45Q70EL2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.81■□□□□ 0.28
USP45Q70EL2 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 MIR3909-201ENST00000579518 119 ntBASIC16.81■□□□□ 0.28
USP45Q70EL2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
USP45Q70EL2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USP45Q70EL2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
USP45Q70EL2 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USP45Q70EL2 AC092919.2-201ENST00000623631 1645 ntBASIC16.81■□□□□ 0.28
USP45Q70EL2 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms