Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 MIR6869-201ENST00000619434 62 ntBASIC13.81□□□□□ -0.2
VPS13CQ709C8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.81□□□□□ -0.2
VPS13CQ709C8 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 AC108860.2-201ENST00000562760 2183 ntBASIC13.81□□□□□ -0.2
VPS13CQ709C8 UBALD1-205ENST00000590891 2641 ntBASIC13.81□□□□□ -0.2
VPS13CQ709C8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 PRYP6-201ENST00000514804 343 ntBASIC13.81□□□□□ -0.2
VPS13CQ709C8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VPS13CQ709C8 KRT18P55-202ENST00000578578 1546 ntBASIC13.81□□□□□ -0.2
VPS13CQ709C8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.81□□□□□ -0.2
VPS13CQ709C8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 MIR1908-201ENST00000410394 80 ntBASIC13.8□□□□□ -0.2
VPS13CQ709C8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 AL079307.3-201ENST00000556114 283 ntBASIC13.8□□□□□ -0.2
VPS13CQ709C8 AC105021.1-202ENST00000570572 669 ntBASIC13.8□□□□□ -0.2
VPS13CQ709C8 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 DOC2GP-202ENST00000514950 1163 ntBASIC13.8□□□□□ -0.2
VPS13CQ709C8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 AL133338.1-201ENST00000565695 1517 ntBASIC13.8□□□□□ -0.2
VPS13CQ709C8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.8□□□□□ -0.2
VPS13CQ709C8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VPS13CQ709C8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 AC135050.7-201ENST00000624508 2218 ntBASIC13.79□□□□□ -0.2
VPS13CQ709C8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13CQ709C8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VPS13CQ709C8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 AC020907.1-201ENST00000616460 1350 ntBASIC13.79□□□□□ -0.2
VPS13CQ709C8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.79□□□□□ -0.2
VPS13CQ709C8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms