Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDZRN4Q6ZMN7 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 RNF216P1-203ENST00000404404 2427 ntBASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 TSPY12P-201ENST00000421279 868 ntBASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 KRT16P4-201ENST00000453883 522 ntBASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 MINOS1P3-201ENST00000457048 203 ntBASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 AL031008.1-201ENST00000619963 541 ntBASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.41■□□□□ 0.7
PDZRN4Q6ZMN7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 AC104692.2-201ENST00000603054 253 ntBASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDZRN4Q6ZMN7 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms