Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 AC004951.3-201ENST00000418645 1148 ntBASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 AC091390.4-202ENST00000476426 537 ntBASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 RPPH1-201ENST00000516869 333 ntBASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 AL031985.4-201ENST00000642138 673 ntBASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
KCNIP4Q6PIL6 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CICP13-201ENST00000422015 2789 ntBASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 SLC25A1P3-201ENST00000395415 828 ntBASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 ITM2C-210ENST00000620962 501 ntBASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CR392000.1-201ENST00000624770 1228 ntBASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.07□□□□□ -0.32
KCNIP4Q6PIL6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms