Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CNKSR3Q6P9H4 AL671710.1-201ENST00000610245 2349 ntBASIC17.89■□□□□ 0.46
CNKSR3Q6P9H4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CNKSR3Q6P9H4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNKSR3Q6P9H4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CNKSR3Q6P9H4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 ACA64.2-201ENST00000459014 129 ntBASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 CD81-207ENST00000481687 890 ntTSL 2 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 AC044860.1-202ENST00000559481 777 ntBASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 AC004790.1-201ENST00000612686 536 ntBASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.89■□□□□ 0.45
CNKSR3Q6P9H4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AL023806.1-201ENST00000603994 1649 ntBASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AC079776.1-201ENST00000401540 1152 ntBASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AC114501.2-201ENST00000439631 535 ntBASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AC106886.1-201ENST00000568660 600 ntBASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AC007431.3-201ENST00000623221 587 ntBASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 SLC7A15P-201ENST00000424028 1363 ntBASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 KRT8P39-201ENST00000396270 1433 ntBASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CNKSR3Q6P9H4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 LINC02012-201ENST00000608206 1725 ntBASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CNKSR3Q6P9H4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms