Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.08■□□□□ 0.65
PPP4R3AQ6IN85 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 POLD2P1-201ENST00000511220 997 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 KRT19P2-202ENST00000557173 1012 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 AL031432.2-201ENST00000566714 459 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 AL928711.1-201ENST00000570165 459 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 CYP2A7P1-201ENST00000595391 815 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 AP001350.2-201ENST00000625104 1094 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 SNX33P1-201ENST00000592116 1762 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 AC025580.3-201ENST00000617932 1424 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 RNF216P1-203ENST00000404404 2427 ntBASIC19.08■□□□□ 0.64
PPP4R3AQ6IN85 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 BCAR1-209ENST00000546196 1340 ntBASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 MIR940-201ENST00000401276 94 ntBASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 HMGA1P7-201ENST00000406908 502 ntBASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.07■□□□□ 0.64
PPP4R3AQ6IN85 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 PMS2P7-201ENST00000506558 1336 ntBASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 FABP5-202ENST00000396359 986 ntTSL 5 BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 PDPK2P-202ENST00000562415 1191 ntBASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 AC040169.1-201ENST00000565382 521 ntBASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 AC092865.6-201ENST00000642101 219 ntBASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 AC084018.2-201ENST00000613093 2607 ntBASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PPP4R3AQ6IN85 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms